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European Molecular Biology Laboratory
last mo.

Scientific Workflows Developer(m/w/x)

Heidelberg
from 4,031.02 / month
Full-timeOn-siteExperienced
Data Science

Description

In this role, you will focus on standardizing and harmonizing data workflows across EMBL, collaborating with researchers to create robust data pipelines. You will also ensure that data handling aligns with FAIR principles while supporting staff training and communication.

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Requirements

  • Master’s degree or higher in Biology, Computer Science, or related field
  • Experience building and executing scientific workflows
  • Excellent command of Python, R, and/or Julia
  • Understanding of open source scientific workflow platforms
  • Understanding of software engineering best practices
  • Desire to engage with open-source communities
  • Passion for supporting researchers
  • Strong abilities in cross-disciplinary collaboration
  • PhD in computational biology, bioinformatics, or related field
  • Experience with novel, emerging data types
  • Experience with infrastructure deployment and container orchestration
  • Experience with scientific workflows using HPC environments
  • Experience in writing efficient user documentation

Education

Master's degree
OR
Doctoral / PhD

Work Experience

approx. 1 - 4 years

Tasks

  • Develop strategies to standardize data formats and workflows
  • Implement harmonized data pipelines across EMBL's six sites
  • Collaborate with researchers on reusable and reproducible data pipelines
  • Support the development of local and pan-EMBL data management pipelines
  • Create solutions for integrating multimodal data
  • Embed FAIR principles in data handling processes
  • Contribute to onboarding and training of research staff
  • Facilitate communication and data flow within EMBL and with external scientists
  • Explore new methods and technologies for EMBL initiatives

Tools & Technologies

PythonRJuliaNextflowSnakemakeKubernetesAnsible

Languages

EnglishBusiness Fluent

Benefits

Other Benefits

  • Generous benefits
  • Death benefit
  • Long-term care insurance
  • On-site library
  • Visa exemption

Additional Allowances

  • Salary free of income tax
  • Non-resident allowances
  • Relocation package including installation grant
  • Education grant for private schooling
  • Financial support to travel back to your home country every second year
  • Monthly non-resident allowance

Family Support

  • Monthly family allowance
  • Child allowance
  • 10 days of child sick leave

Competitive Pay

  • Annual salary review

Retirement Plans

  • Pension scheme

Job Security

  • Accident-at-work insurance

Flexible Working

  • Flexible working arrangements

Healthcare & Fitness

  • Private medical insurance for you and your immediate family
  • Subsidised on-site gym

More Vacation Days

  • Generous time off: 30 days annual leave

Parking & Commuter Benefits

  • Free shuttle bus

Free or Subsidized Food

  • Cafeteria

Informal Culture

  • Casual dress code

Team Events

  • Extensive sports and social club activities

Childcare

  • Kindergarten

Generous Parental Leave

  • Generous paid maternity/parental leave
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