Deutsches Krebsforschungszentrum (DKFZ)
Research Software Engineer / HIFIS Consultant(m/w/x)
Full-timeWith HomeofficeExperienced
Heidelberg
New Job?Nejo!
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EU
European Molecular Biology LaboratoryResearch Software Engineer - Spatial-omics(m/w/x)
Heidelberg
from 4,031.02 / month
Full-timeWith Home OfficeExperienced
Description
In this role, you will enhance the SpatialData framework by developing robust software and maintaining its codebase. You will also contribute to key bioimaging data formats and ensure smooth software operations through automation and improved documentation.
Let AI find the perfect jobs for you!
Upload your CV and Nejo AI will find matching job offers for you.
Requirements
- •Master’s degree in Computer Science, Mathematics, Physics, Engineering, Life Sciences, or related field, or proven equivalent experience
- •Knowledge of Python libraries: dask, xarray, geopandas, zarr, ome-zarr, napari, AnnData, Scanpy, SpatialData, or other scverse software
- •Curiosity-driven mindset toward new methods and tech
- •Passion for open-source software and commitment to reducing adoption barriers
- •Excellent communication and organisational skills
- •Proven ability to work creatively and rigorously in a team environment
- •Fluency in English
- •Experience contributing to open-source projects, using git and familiar with GitHub workflows
- •Background in user support (software support, scientific support)
- •Bioinformatics experience in single-cell and spatial biology with a learning mindset
- •Experience in organising and delivering scientific workshops
Education
Master's degree
Work Experience
approx. 1 - 4 years
Tasks
- •Develop software to enhance the SpatialData framework's robustness and scalability
- •Maintain the SpatialData framework, focusing on refactoring code for stability and easier maintenance
- •Contribute to the Next Generation File Format (NGFF) and OME-Zarr specifications for bioimaging data
- •Set up, test, and ensure the smooth operation of continuous integration and automation systems
- •Improve documentation, example notebooks, and training materials for the SpatialData framework
Tools & Technologies
Pythondaskxarraygeopandaszarrome-zarrnapariAnnDataScanpySpatialData
Languages
English – Business Fluent
Benefits
Additional Allowances
- •Salary free of income tax
- •Child allowances
- •Non-resident allowances
- •Education grant for private schooling
- •Financial support for travel home
- •Monthly non-resident allowance
Family Support
- •Monthly family allowances
- •10 days child sick leave
Competitive Pay
- •Annual salary review
Retirement Plans
- •Pension scheme
Other Benefits
- •Death benefit
- •Long-term care insurance
- •Relocation package
- •On-site library
Job Security
- •Accident-at-work insurance
Flexible Working
- •Flexible working arrangements
Healthcare & Fitness
- •Private medical insurance
- •Subsidised gym
More Vacation Days
- •30 days annual leave
Parking & Commuter Benefits
- •Free shuttle bus
Informal Culture
- •Casual dress code
Team Events
- •Sports and social club activities
Childcare
- •Kindergarten
Generous Parental Leave
- •Generous paid maternity leave
Find the original job posting in its most current version here. Nejo automatically captured this job from the website of European Molecular Biology Laboratory and processed the information on Nejo with the help of AI for you. Despite careful analysis, some information may be incomplete or inaccurate. Please always verify all details in the original posting! Content and copyrights of the original posting belong to the advertising company.
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EU
European Molecular Biology LaboratoryResearch Software Engineer - Spatial-omics(m/w/x)
Heidelberg
from 4,031.02 / month
Full-timeWith Home OfficeExperienced
New Job?Nejo!
The AI Job Search Engine
Description
In this role, you will enhance the SpatialData framework by developing robust software and maintaining its codebase. You will also contribute to key bioimaging data formats and ensure smooth software operations through automation and improved documentation.
Let AI find the perfect jobs for you!
Upload your CV and Nejo AI will find matching job offers for you.
Requirements
- •Master’s degree in Computer Science, Mathematics, Physics, Engineering, Life Sciences, or related field, or proven equivalent experience
- •Knowledge of Python libraries: dask, xarray, geopandas, zarr, ome-zarr, napari, AnnData, Scanpy, SpatialData, or other scverse software
- •Curiosity-driven mindset toward new methods and tech
- •Passion for open-source software and commitment to reducing adoption barriers
- •Excellent communication and organisational skills
- •Proven ability to work creatively and rigorously in a team environment
- •Fluency in English
- •Experience contributing to open-source projects, using git and familiar with GitHub workflows
- •Background in user support (software support, scientific support)
- •Bioinformatics experience in single-cell and spatial biology with a learning mindset
- •Experience in organising and delivering scientific workshops
Education
Master's degree
Work Experience
approx. 1 - 4 years
Tasks
- •Develop software to enhance the SpatialData framework's robustness and scalability
- •Maintain the SpatialData framework, focusing on refactoring code for stability and easier maintenance
- •Contribute to the Next Generation File Format (NGFF) and OME-Zarr specifications for bioimaging data
- •Set up, test, and ensure the smooth operation of continuous integration and automation systems
- •Improve documentation, example notebooks, and training materials for the SpatialData framework
Tools & Technologies
Pythondaskxarraygeopandaszarrome-zarrnapariAnnDataScanpySpatialData
Languages
English – Business Fluent
Benefits
Additional Allowances
- •Salary free of income tax
- •Child allowances
- •Non-resident allowances
- •Education grant for private schooling
- •Financial support for travel home
- •Monthly non-resident allowance
Family Support
- •Monthly family allowances
- •10 days child sick leave
Competitive Pay
- •Annual salary review
Retirement Plans
- •Pension scheme
Other Benefits
- •Death benefit
- •Long-term care insurance
- •Relocation package
- •On-site library
Job Security
- •Accident-at-work insurance
Flexible Working
- •Flexible working arrangements
Healthcare & Fitness
- •Private medical insurance
- •Subsidised gym
More Vacation Days
- •30 days annual leave
Parking & Commuter Benefits
- •Free shuttle bus
Informal Culture
- •Casual dress code
Team Events
- •Sports and social club activities
Childcare
- •Kindergarten
Generous Parental Leave
- •Generous paid maternity leave
Find the original job posting in its most current version here. Nejo automatically captured this job from the website of European Molecular Biology Laboratory and processed the information on Nejo with the help of AI for you. Despite careful analysis, some information may be incomplete or inaccurate. Please always verify all details in the original posting! Content and copyrights of the original posting belong to the advertising company.
About the Company
European Molecular Biology Laboratory
Industry
Healthcare
Description
The company is a world leader in scientific research and develops cutting-edge technologies for data management in biology.
Not a perfect match?
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